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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20566785_20567468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20566785 - 20567468

Intron Length:

684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CTTTCCTTAACA

Flanking Amino Acid:

TNKKRLQQLSGEVHTFEALD

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

81.1

0.7

0.8

77.1

30.2

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

90.4

1.26

0.9

91.36

30.2

Associated Gene:

Gene:

PIF1

Ensembl Gene ID:

ENSAPLG00000009068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009436

20562222 - 20570152

7931