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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20569594_20569681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20569594 - 20569681

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAC

U12 Branch Point Sequence:

GCCGCCTTCACA

Flanking Amino Acid:

GEEPGQRPAEVPRAQRRPPA

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

67.8

0.44

30.1

Major PPT

71.9

0.49

0.9

65.5

36.1

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

0.05

1.9

59.27

46.6

Associated Gene:

Gene:

PIF1

Ensembl Gene ID:

ENSAPLG00000009068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009436

20562222 - 20570152

7931