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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20575304_20576057_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
20575304 - 20576057

Intron Length:
754

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTGAGCGTG

5'SS Class:
major

3'SS Sequence:
TTCCTTTTCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCTCAG

U12 Branch Point Sequence:
TTCCTTTTCACA

Flanking Amino Acid:
EARPKKPNDVEGLKQCLAEF

Intron Amino Acid Position:
54

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1
64.9
41.1

Major BPS
55.8
0.14
1.6
65.3
43.7

Major PPT
86.7
0.83
0.7
82.7
25.9

Minor 5ss
34.6
-1.7
3.4
43.3
45.4

Minor BPS
54.8
0.14
1.7
67.58
39.4

Associated Gene:

Gene:
EBNA1BP2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20570928 - 20576940
6013

20570928 - 20576940
6013