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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20576538_20576616_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20576538 - 20576616

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGCCCCG

5'SS Class:

weak_major

3'SS Sequence:

CTCTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCGTGCTGACCG

Flanking Amino Acid:

TEHGQQAFFPGREKSRGVQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.2

44.1

45.3

Major BPS

66.3

0.4

1.1

41.8

Major PPT

78.3

0.64

0.7

73.1

25.2

Minor 5ss

36.9

-1.5

3.3

47.9

47.8

Minor BPS

-0.7

2.1

43.2

48.2

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009785

20576056 - 20597309

21254

ENSAPLT00000009816

20576056 - 20596565

20510