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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20581550_20581926_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20581550 - 20581926

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTGCAT

U12 Branch Point Sequence:

TCTACAGTAACG

Flanking Amino Acid:

KEFAVRRCEECSFSNGGHLF

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

87.7

27.9

Major BPS

53.6

0.09

1.4

65.3

41.5

Major PPT

85.2

0.79

0.7

81.3

29.9

Minor 5ss

33.9

-1.8

3.3

47.8

47.9

Minor BPS

47.9

-0.3

2.3

61.22

46.2

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009816

20576056 - 20596565

20510

ENSAPLT00000009785

20576056 - 20597309

21254