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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20582041_20582509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20582041 - 20582509

Intron Length:

469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTTGTTTTGCTT

Flanking Amino Acid:

TNNLKGHSGKIRAVKWSADD

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.2

83.2

30.8

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

77.8

0.63

72.8

42.2

Minor 5ss

30.5

-2.2

2.5

33.7

41.5

Minor BPS

42.5

-0.5

3.4

73.17

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009816

20576056 - 20596565

20510

ENSAPLT00000009785

20576056 - 20597309

21254