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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20582723_20583346_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20582723 - 20583346

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCTAA

5'SS Class:

major

3'SS Sequence:

TTACTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TTTTTGTTACTC

Flanking Amino Acid:

QTLKEISESSIQHEVPAFDV

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

67.6

35.8

Major BPS

71.4

0.53

1.2

63.4

Major PPT

82.6

0.73

0.7

81.5

30.2

Minor 5ss

38.2

-1.3

47.1

48.3

Minor BPS

53.1

0.08

2.3

73.1

38.8

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009816

20576056 - 20596565

20510

ENSAPLT00000009785

20576056 - 20597309

21254