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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20584511_20586632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20584511 - 20586632

Intron Length:

2122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATTT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTTTACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTCTTTACCA

Flanking Amino Acid:

ELGSLKTKHQILQAEKEKQE

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

83.3

29.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

80.5

0.69

0.9

74.5

39.7

Minor 5ss

2.8

73.4

43.4

Minor BPS

72.2

0.69

1.5

80.29

35.7

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009816

20576056 - 20596565

20510

ENSAPLT00000009785

20576056 - 20597309

21254