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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20586727_20587612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20586727 - 20587612

Intron Length:

886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTAGATGT

5'SS Class:

major

3'SS Sequence:

TTCCTGTTACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTAGTTTTATCA

Flanking Amino Acid:

NKQAKEMQDLESESNQKLLM

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

73.6

37.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

0.59

0.9

69.6

40.4

Minor 5ss

-1.6

48.8

46.8

Minor BPS

55.5

0.17

1.7

67.09

39.9

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009816

20576056 - 20596565

20510

ENSAPLT00000009785

20576056 - 20597309

21254