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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20587804_20588853_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20587804 - 20588853

Intron Length:

1050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTAACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TGTTCTCTAATA

Flanking Amino Acid:

LNEKTVLLEEAEEDIRQQLQ

Intron Amino Acid Position:

837

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

75.1

35.1

Major BPS

82.2

0.8

0.9

81.6

Major PPT

73.4

0.53

0.9

66.6

33.1

Minor 5ss

32.4

-2

3.2

42.3

44.8

Minor BPS

66.5

0.51

1.6

76.77

34.1

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009816

20576056 - 20596565

20510

ENSAPLT00000009785

20576056 - 20597309

21254