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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20589028_20589809_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20589028 - 20589809

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATCTCTT

5'SS Class:

weak_major

3'SS Sequence:

TTTGCCTCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GATTTTTAAACT

Flanking Amino Acid:

KGEIGVMNKRLSSLQKELKE

Intron Amino Acid Position:

895

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.2

65.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.5

0.64

0.8

70.6

36.2

Minor 5ss

54.8

0.16

2.5

67.6

43.5

Minor BPS

62.7

0.48

1.6

77.16

39.5

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009816

20576056 - 20596565

20510

ENSAPLT00000009785

20576056 - 20597309

21254