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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20590500_20591615_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20590500 - 20591615

Intron Length:

1116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTTCTCTTAATC

Flanking Amino Acid:

IEKMNEQIHEMEGELERFQK

Intron Amino Acid Position:

996

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

77.5

32.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

83.9

0.76

0.8

Minor 5ss

29.2

-2.4

2.9

35.3

41.5

Minor BPS

72.5

0.68

1.2

75.09

35.7

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009816

20576056 - 20596565

20510

ENSAPLT00000009785

20576056 - 20597309

21254