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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20592328_20592449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20592328 - 20592449

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTGCCCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAG

U12 Branch Point Sequence:

TGAGGCAAAACT

Flanking Amino Acid:

YTKYVQQLDMVETEEVDVDL

Intron Amino Acid Position:

1080

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

64.6

0.36

1.5

63.4

44.3

Major PPT

73.7

0.53

0.9

69.8

36.6

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

42.5

-0.4

2.3

62.34

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009816

20576056 - 20596565

20510

ENSAPLT00000009785

20576056 - 20597309

21254