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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20593643_20596438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

20593643 - 20596438

Intron Length:

2796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTTCCTTATAA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

75.4

37.3

Major BPS

78.6

0.71

78.6

Major PPT

86.4

0.82

0.8

81.1

35.9

Minor 5ss

47.9

-0.2

2.8

65.3

45.9

Minor BPS

73.6

0.74

1.6

84.92

34.6

Associated Gene:

Gene:

CFAP57

Ensembl Gene ID:

ENSAPLG00000009398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009816

20576056 - 20596565

20510