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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20665629_20666106_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20665629 - 20666106

Intron Length:

478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CCGACTATTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGCAT

U12 Branch Point Sequence:

AGACCCTGAGCA

Flanking Amino Acid:

LSPDRDEEIMRQTEGRVPVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

49.2

-0

1.5

59.7

46.7

Major PPT

69.1

0.43

61.7

38.5

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

49.1

-0

1.7

58.86

39.7

Associated Gene:

Gene:

MED8

Ensembl Gene ID:

ENSAPLG00000010948

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011416

20660694 - 20669286

8593