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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20735949_20737190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20735949 - 20737190

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGAT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

GAGCCCATCACA

Flanking Amino Acid:

AGHPCSLHSQGWADCNGKNL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

38.2

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

76.9

0.6

0.8

68.8

37.2

Minor 5ss

29.5

-2.3

3.8

45.4

49.7

Minor BPS

46.3

-0.2

56.17

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046330

20733120 - 20739551

6432