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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20758717_20758810_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20758717 - 20758810

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGGCC

5'SS Class:

major

3'SS Sequence:

CTCCCCGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCCCAC

U12 Branch Point Sequence:

CCCGTCCCACGG

Flanking Amino Acid:

PVAVDASPDAGWVVPSATLL

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

68.8

Major BPS

47.8

-0.1

1.4

58.1

40.4

Major PPT

56.9

0.16

1.1

52.8

36.7

Minor 5ss

-2.2

3.5

43.1

44.2

Minor BPS

29.1

-1.7

1.8

22.26

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030907

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043335

20753910 - 20759774

5865

ENSAPLT00000033221

20753910 - 20759388

5479

ENSAPLT00000045975

20753910 - 20759774

5865