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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20761723_20762174_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
20761723 - 20762174

Intron Length:
452

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAATGC

5'SS Class:
major

3'SS Sequence:
TCTCTGCACACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAACCAA

U12 Branch Point Sequence:
TTTCTCTGCACA

Flanking Amino Acid:
LSGKPQNAPEGYQNNLKVLY

Intron Amino Acid Position:
148

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71
0.49
1.1
60.4
39.8

Major BPS
49.4
-0
1.3
59.1
37.3

Major PPT
70.8
0.47
0.9
64.8
35.5

Minor 5ss
36.6
-1.5
3.3
51
45.6

Minor BPS
54.7
0.14
1.9
73.43
38.1

Associated Gene:

Gene:
CDC20

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20759188 - 20765174
5987