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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20827564_20827796_F

Intron Information:

Intron Rank:

80312

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20827564 - 20827796

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTCTATTAC

5'SS Class:

weak_major

3'SS Sequence:

GAGTGTGGAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

TTCCCTGTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.9

0.09

1.3

58.1

35.8

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

45.4

-0.2

1.2

38.2

43.3

Minor 5ss

43.1

-0.8

2.7

52.1

39.3

Minor BPS

47.6

-0.3

2.1

57.63

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011859

20815562 - 20850787

35226