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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20828512_20828622_F

Intron Information:

Intron Rank:

80315

Intron Class:

major

Intron Phase:

Intron Coordinates:

20828512 - 20828622

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTACC

5'SS Class:

strong_major

3'SS Sequence:

ACGTTGCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

GGGTAGCTAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

76.6

31.9

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

65.5

0.35

0.9

57.6

38.1

Minor 5ss

37.6

-1.4

2.6

42.3

Minor BPS

40.8

-0.8

2.4

46.87

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011859

20815562 - 20850787

35226