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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20842860_20843292_F

Intron Information:

Intron Rank:

80335

Intron Class:

major

Intron Phase:

Intron Coordinates:

20842860 - 20843292

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CCGTGCTCAGTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

33.3

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

81.6

0.71

0.7

73.1

31.8

Minor 5ss

25.8

-2.8

2.9

29.5

43.2

Minor BPS

-0.9

2.1

38.61

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011859

20815562 - 20850787

35226