Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_20846986_20847066_F

Intron Information:

Intron Rank:

80340

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20846986 - 20847066

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCTGGAG

5'SS Class:

major

3'SS Sequence:

GCAGCCGGCCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCCGAG

U12 Branch Point Sequence:

GGAGCCGGAGCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.1

39.9

Major BPS

38.5

-0.7

1.5

29.6

35.9

Major PPT

-0.5

1.6

30.5

36.6

Minor 5ss

22.1

-3.2

3.4

28.4

43.9

Minor BPS

38.9

-0.8

2.2

45.93

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011859

20815562 - 20850787

35226