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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20852019_20852188_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20852019 - 20852188

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGAGCCC

5'SS Class:

weak_major

3'SS Sequence:

ATTTCCTCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

AGCCTCCCATTT

Flanking Amino Acid:

RNLETYLPLIGHIQIAQVPG

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.21

1.2

48.1

39.1

Major BPS

59.9

0.25

1.3

70.1

Major PPT

75.4

0.57

0.8

70.7

29.6

Minor 5ss

30.5

-2.2

3.6

42.5

44.7

Minor BPS

38.4

-0.8

1.8

49.23

37.9

Associated Gene:

Gene:

HYI

Ensembl Gene ID:

ENSAPLG00000012474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039671

20851595 - 20853977

2383

ENSAPLT00000012998

20851595 - 20853977

2383