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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20852259_20852564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20852259 - 20852564

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAC

U12 Branch Point Sequence:

TGTTCCTACACA

Flanking Amino Acid:

VGRPNLKLQLDIFHCQIMDG

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.5

41.3

Major BPS

58.9

0.22

1.3

58.4

Major PPT

74.6

0.55

0.9

69.2

Minor 5ss

32.5

-2

38.1

40.9

Minor BPS

0.31

2.1

75.93

41.5

Associated Gene:

Gene:

HYI

Ensembl Gene ID:

ENSAPLG00000012474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039671

20851595 - 20853977

2383

ENSAPLT00000012998

20851595 - 20853977

2383