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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20852615_20852740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20852615 - 20852740

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCCCCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TGGCTCTCACTT

Flanking Amino Acid:

PRYFLNTPQQAVAILEKVGR

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

64.3

47.1

Major BPS

72.7

0.56

30.1

Major PPT

68.5

0.42

0.8

62.5

28.6

Minor 5ss

30.2

-2.3

3.2

38.6

46.5

Minor BPS

46.6

-0.1

1.8

61.83

42.5

Associated Gene:

Gene:

HYI

Ensembl Gene ID:

ENSAPLG00000012474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039671

20851595 - 20853977

2383

ENSAPLT00000012998

20851595 - 20853977

2383