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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20852820_20852956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20852820 - 20852956

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGAGG

5'SS Class:

major

3'SS Sequence:

AGTGCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTGAG

U12 Branch Point Sequence:

TGCAGGGTGACA

Flanking Amino Acid:

LRYAADLLAQEDMVGLVEPI

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.36

1.3

55.2

Major BPS

43.4

-0.4

1.6

34.6

43.7

Major PPT

0.43

58.2

46.8

Minor 5ss

35.8

-1.6

3.4

48.3

47.5

Minor BPS

35.2

-1.1

2.7

47.26

Associated Gene:

Gene:

HYI

Ensembl Gene ID:

ENSAPLG00000012474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039671

20851595 - 20853977

2383

ENSAPLT00000012998

20851595 - 20853977

2383