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Intron Name: Anas_platyrhynchos_platyrhynchos_8_20853072_20853366_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20853072 - 20853366

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGGAT

U12 Branch Point Sequence:

GGGGCCTGGATC

Flanking Amino Acid:

VQYGREVGCSRIHLMAGRVP

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

48.6

-0

1.4

48.7

45.1

Major PPT

72.1

0.5

0.9

65.6

36.1

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

47.5

-0.2

1.6

51.59

39.9

Associated Gene:

Gene:

HYI

Ensembl Gene ID:

ENSAPLG00000012474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039671

20851595 - 20853977

2383

ENSAPLT00000012998

20851595 - 20853977

2383