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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2106167_2131092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2106167 - 2131092

Intron Length:

24926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATGT

5'SS Class:

strong_major

3'SS Sequence:

ATATGTCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

AGCTCTTCAAAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

72.5

39.9

Major BPS

78.2

0.7

79.9

32.6

Major PPT

78.1

0.63

0.9

74.2

40.6

Minor 5ss

38.3

-1.3

3.4

56.2

Minor BPS

51.5

0.03

1.6

59.15

39.6

Associated Gene:

Gene:

PTBP2

Ensembl Gene ID:

ENSAPLG00000011687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012235

2106136 - 2152273

46138