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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21158957_21165266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21158957 - 21165266

Intron Length:

6310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGTAG

5'SS Class:

major

3'SS Sequence:

TTAAACTCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

TCTGTTTAAACT

Flanking Amino Acid:

SNGRIKQLRSVFFGGTPIRG

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

66.6

41.6

Major BPS

72.4

0.56

79.3

29.5

Major PPT

70.3

0.46

0.9

66.5

Minor 5ss

35.6

-1.6

3.2

38.1

46.8

Minor BPS

56.8

0.29

1.8

74.22

43.6

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027105

21026422 - 21257164

230743