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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21166463_21175098_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21166463 - 21175098

Intron Length:

8636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

ATAATCTGAATT

Flanking Amino Acid:

QLRSGGTPIRGALQIENSEE

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

73.5

0.53

68.8

41.9

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

59.4

0.37

1.4

72.89

37.7

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027105

21026422 - 21257164

230743

ENSAPLT00000013075

21026422 - 21257164

230743