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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2118178_2130439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2118178 - 2130439

Intron Length:

12262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTTCTAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

81.4

0.71

0.8

76.1

32.5

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

59.8

0.31

1.6

70.97

35.8

Associated Gene:

Gene:

PTBP2

Ensembl Gene ID:

ENSAPLG00000011687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027173

2106136 - 2152273

46138