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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2118178_2131092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2118178 - 2131092

Intron Length:

12915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ATATGTCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

AGCTCTTCAAAC

Flanking Amino Acid:

NSNMSSMVVTANGNDNKKFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

78.2

0.7

79.9

32.6

Major PPT

78.1

0.63

0.9

74.2

40.6

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

51.5

0.03

1.6

59.15

39.6

Associated Gene:

Gene:

PTBP2

Ensembl Gene ID:

ENSAPLG00000011687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027774

2104641 - 2152445

47805

ENSAPLT00000020802

2104641 - 2151206

46566

ENSAPLT00000036723

2104641 - 2136631

31991