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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21184341_21190260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21184341 - 21190260

Intron Length:

5920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTCCT

5'SS Class:

major

3'SS Sequence:

CTCCTTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTACTAG

U12 Branch Point Sequence:

TGTCCCCCTACT

Flanking Amino Acid:

ANLYVRDQREVRRVAPRFSI

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.2

67.4

43.6

Major BPS

40.4

-0.6

1.6

36.2

41.1

Major PPT

81.8

0.71

0.8

79.5

32.5

Minor 5ss

31.8

-2.1

42.9

Minor BPS

47.1

-0.1

2.2

72.44

43.4

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027105

21026422 - 21257164

230743