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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21190531_21192362_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21190531 - 21192362

Intron Length:

1832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCAATTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

AATTATTTAAAT

Flanking Amino Acid:

IEATAQITVKALPKPPTEPL

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.8

39.8

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

77.2

0.61

0.9

70.4

33.7

Minor 5ss

33.3

-1.9

3.3

48.8

Minor BPS

63.9

0.51

1.6

78.26

37.2

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024389

21026422 - 21257351

230930

ENSAPLT00000041503

21026422 - 21258535

232114

ENSAPLT00000023764

21026422 - 21257168

230747

ENSAPLT00000037272

21026422 - 21257443

231022

ENSAPLT00000013075

21026422 - 21257164

230743

ENSAPLT00000035661

21026422 - 21257168

230747

ENSAPLT00000004338

21026422 - 21257443

231022

ENSAPLT00000027105

21026422 - 21257164

230743

ENSAPLT00000044504

21026422 - 21256265

229844