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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21192945_21193503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21192945 - 21193503

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTACGTATG

5'SS Class:

major

3'SS Sequence:

GTTTGGTCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

CTGGCACTAACC

Flanking Amino Acid:

DIIQVKTQQGVPAQPADFQA

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

72.9

44.2

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

73.3

0.53

69.5

41.6

Minor 5ss

37.8

-1.4

42.4

44.5

Minor BPS

47.3

-0.2

2.1

59.99

44.9

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023764

21026422 - 21257168

230747

ENSAPLT00000037272

21026422 - 21257443

231022

ENSAPLT00000013075

21026422 - 21257164

230743

ENSAPLT00000035661

21026422 - 21257168

230747

ENSAPLT00000004338

21026422 - 21257443

231022

ENSAPLT00000027105

21026422 - 21257164

230743

ENSAPLT00000044504

21026422 - 21256265

229844

ENSAPLT00000024389

21026422 - 21257351

230930

ENSAPLT00000041503

21026422 - 21258535

232114