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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21194531_21202710_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21194531 - 21202710

Intron Length:

8180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

GTGTGTGTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TGCCTGCTAAAT

Flanking Amino Acid:

PTIEARTAQSMPSAPPRKVE

Intron Amino Acid Position:

602

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

71.5

0.48

1.1

61.5

48.6

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

41.6

-0.5

2.3

59.81

43.2

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035661

21026422 - 21257168

230747