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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21199707_21199775_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21199707 - 21199775

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CATTGCCTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAC

U12 Branch Point Sequence:

CATTGCCTACCA

Flanking Amino Acid:

CVSTSSTTIRAVEGDDSTKH

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

43.7

Major BPS

65.7

0.39

1.1

67.9

37.7

Major PPT

68.2

0.41

59.5

41.4

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

45.5

-0.3

2.3

60.91

44.9

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044504

21026422 - 21256265

229844