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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21214764_21220199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21214764 - 21220199

Intron Length:

5436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGCAT

U12 Branch Point Sequence:

GCTGCATGAGCG

Flanking Amino Acid:

DSYKSAVPFKILYNSQSVEV

Intron Amino Acid Position:

1034

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

47.9

-0.1

1.6

59.3

47.1

Major PPT

79.5

0.66

0.8

76.5

32.1

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

42.3

-0.7

46.31

45.8

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044504

21026422 - 21256265

229844

ENSAPLT00000004338

21026422 - 21257443

231022

ENSAPLT00000027105

21026422 - 21257164

230743

ENSAPLT00000041503

21026422 - 21258535

232114

ENSAPLT00000024389

21026422 - 21257351

230930

ENSAPLT00000023764

21026422 - 21257168

230747

ENSAPLT00000037272