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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21230097_21232825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21230097 - 21232825

Intron Length:

2729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTAAT

U12 Branch Point Sequence:

GTTTCTTTTCTT

Flanking Amino Acid:

EMRRLNYQTPGASVPSCPNI

Intron Amino Acid Position:

1310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

61.6

0.29

1.3

63.6

42.5

Major PPT

92.5

0.96

0.6

88.1

21.6

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

43.8

-0.4

3.6

76.14

40.9

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027105

21026422 - 21257164

230743

ENSAPLT00000024389

21026422 - 21257351

230930

ENSAPLT00000023764

21026422 - 21257168

230747

ENSAPLT00000044504

21026422 - 21256265

229844

ENSAPLT00000004338

21026422 - 21257443

231022

ENSAPLT00000037272

21026422 - 21257443

231022