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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21230097_21235240_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21230097 - 21235240

Intron Length:

5144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCGCACCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCGCAC

U12 Branch Point Sequence:

CTTGTCGCACCC

Flanking Amino Acid:

EMRRLNYQTPGMRDHPPIPV

Intron Amino Acid Position:

1325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

46.9

-0.1

1.5

41.8

Major PPT

0.29

0.9

54.9

35.4

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

39.9

-0.7

2.3

53.1

45.1

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041503

21026422 - 21258535

232114

ENSAPLT00000035661

21026422 - 21257168

230747

ENSAPLT00000013075

21026422 - 21257164

230743