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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21235339_21242095_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21235339 - 21242095

Intron Length:

6757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

GCTCTAACCACT

Flanking Amino Acid:

DGLKFSQEYESIDPGQQFTW

Intron Amino Acid Position:

1354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

72.3

0.55

73.3

28.9

Major PPT

77.7

0.62

0.7

72.4

25.7

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

36.1

-1

2.1

52.4

41.8

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023764

21026422 - 21257168

230747

ENSAPLT00000037272

21026422 - 21257443

231022

ENSAPLT00000013075

21026422 - 21257164

230743

ENSAPLT00000035661

21026422 - 21257168

230747

ENSAPLT00000004338

21026422 - 21257443

231022

ENSAPLT00000027105

21026422 - 21257164

230743

ENSAPLT00000044504

21026422 - 21256265

229844

ENSAPLT00000024389

21026422 - 21257351

230930

ENSAPLT00000041503

21026422 - 21258535

232114