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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21256371_21256843_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21256371 - 21256843

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTGCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

GGGTCTCTAACT

Flanking Amino Acid:

GQDGPITVHCSAGVGRTGVF

Intron Amino Acid Position:

1836

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

72.3

0.55

73.3

28.9

Major PPT

0.43

0.9

64.1

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

60.5

0.41

1.7

74.34

42.2

Associated Gene:

Gene:

PTPRF

Ensembl Gene ID:

ENSAPLG00000012532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024389

21026422 - 21257351

230930

ENSAPLT00000041503

21026422 - 21258535

232114

ENSAPLT00000023764

21026422 - 21257168

230747

ENSAPLT00000037272

21026422 - 21257443

231022

ENSAPLT00000013075

21026422 - 21257164

230743

ENSAPLT00000035661