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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21274470_21275711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21274470 - 21275711

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTATCTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

CTATCTGTTACA

Flanking Amino Acid:

AVCMLFQTYQAECGGNSQSS

Intron Amino Acid Position:

673

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.5

35.1

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

78.3

0.64

0.9

71.9

37.8

Minor 5ss

43.5

-0.7

2.6

60.2

44.3

Minor BPS

47.7

-0.1

2.3

63.36

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003570

21262340 - 21281855

19516