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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21275917_21276193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21275917 - 21276193

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CTTATCTGAAAT

Flanking Amino Acid:

CRNCQVCVHASCYGVPPDKA

Intron Amino Acid Position:

741

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

79.1

0.72

69.3

38.4

Major PPT

66.1

0.36

57.9

43.1

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

57.3

0.31

1.6

74.7

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003570

21262340 - 21281855

19516