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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2142951_2149131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2142951 - 2149131

Intron Length:

6181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGACTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTATTTTAAAA

Flanking Amino Acid:

AAFAKETSLLAVPGALSPLA

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

71.6

38.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.7

0.71

0.8

76.1

32.4

Minor 5ss

42.6

-0.8

3.1

59.4

45.3

Minor BPS

68.2

0.57

1.4

76.88

33.6

Associated Gene:

Gene:

PTBP2

Ensembl Gene ID:

ENSAPLG00000011687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027173

2106136 - 2152273

46138

ENSAPLT00000020802

2104641 - 2151206

46566

ENSAPLT00000012235

2106136 - 2152273

46138

ENSAPLT00000027774

2104641 - 2152445

47805