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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2149272_2150688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2149272 - 2150688

Intron Length:

1417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAC

U12 Branch Point Sequence:

CTTGTCTTACGC

Flanking Amino Acid:

VLLVSNLNEEMVTPQSLFTL

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.2

83.2

30.8

Major BPS

63.8

0.34

1.2

57.4

41.4

Major PPT

73.7

0.53

74.4

28.2

Minor 5ss

30.5

-2.2

2.5

33.7

41.5

Minor BPS

48.1

-0.1

60.68

45.3

Associated Gene:

Gene:

PTBP2

Ensembl Gene ID:

ENSAPLG00000011687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027173

2106136 - 2152273

46138

ENSAPLT00000012235

2106136 - 2152273

46138

ENSAPLT00000027774

2104641 - 2152445

47805