Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_21503094_21503627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21503094 - 21503627

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGGAGG

5'SS Class:

major

3'SS Sequence:

GCCCCACCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

TCTGCCCCACCT

Flanking Amino Acid:

VVGAPLTPNSCRGRKARPRG

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

60.8

45.3

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

65.8

0.36

0.9

54.5

35.5

Minor 5ss

26.7

-2.7

31.4

42.5

Minor BPS

45.5

-0.2

2.2

68.6

47.9

Associated Gene:

Gene:

DMAP1

Ensembl Gene ID:

ENSAPLG00000010717

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011182

21476819 - 21503672

26854