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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2150723_2151179_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2150723 - 2151179

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TGACTTTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

TTACCTTTGACT

Flanking Amino Acid:

VTPQSLFTLFGVYGDVQRVK

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

34.1

Major BPS

74.1

0.6

66.7

39.9

Major PPT

54.1

0.09

1.2

56.4

42.5

Minor 5ss

48.4

-0.1

2.5

44.2

Minor BPS

74.6

0.86

1.1

85.56

34.2

Associated Gene:

Gene:

PTBP2

Ensembl Gene ID:

ENSAPLG00000011687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012235

2106136 - 2152273

46138

ENSAPLT00000027774

2104641 - 2152445

47805

ENSAPLT00000027173

2106136 - 2152273

46138