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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21645032_21713518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21645032 - 21713518

Intron Length:

68487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

AATTGATTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TATTTCATAATC

Flanking Amino Acid:

SSSPEDRSDRYRSDNQRGPQ

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.9

31.3

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

0.32

1.1

55.5

48.1

Minor 5ss

39.4

-1.2

2.7

51.9

37.5

Minor BPS

67.2

0.52

1.5

76.23

33.5

Associated Gene:

Gene:

RNF220

Ensembl Gene ID:

ENSAPLG00000010257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031958

21644291 - 21814491

170201

ENSAPLT00000010720

21639536 - 21821913

182378