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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21747813_21759225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21747813 - 21759225

Intron Length:

11413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TGGCTCTGACCC

Flanking Amino Acid:

ELEKLTQLNISKNSILKDAM

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

69.1

0.47

60.7

37.6

Major PPT

0.65

0.9

76.3

32.2

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

47.6

-0.2

1.7

57.12

41.2

Associated Gene:

Gene:

RNF220

Ensembl Gene ID:

ENSAPLG00000010257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031958

21644291 - 21814491

170201

ENSAPLT00000010720

21639536 - 21821913

182378

ENSAPLT00000040448

21644291 - 21799530

155240